Varaico: Literature-Extracted Genetic Variants

Gene:KIT
Variant:p.E562D

KIT

4,821 papers

RefSeq Summary

This gene encodes a receptor tyrosine kinase. This gene was initially identified as a homolog of the feline sarcoma viral oncogene v-kit and is often referred to as proto-oncogene c-Kit. The canonical...

Pfam Domains

igaa 219–304UCSCImmunoglobulin domain
Ig_PDGFR_d4aa 421–542UCSCPlatelet-derived growth factor receptor Ig-like domain 4
PK_Tyr_Ser-Thraa 590–924UCSCProtein tyrosine and serine/threonine kinase

Gene Aliases

HGNC Name

KIT proto-oncogene, receptor tyrosine kinase

HGNC Previous Symbol

PBT

Papers
RefSeq ID
Protein change
DNA change
Selected Variant
4 papers
NM_000222.3
p.E562D
c.1686G>T
Surrounding Variants
4 papers
NM_000222.3
p.E562D
c.1686G>C
1 paper
NM_000222.3
p.I563del1
c.1687_1688delATA
1 paper
NM_000222.3
p.I563_N564delFs
c.1689_1692del4
1 paper
NM_000222.3
p.E562_T574delins
c.1686_1722delinsT
2 papers
NM_000222.3
p.I563_L576del0
c.1687_1728del42
1 paper
NM_000222.3
p.I563L
c.1687A>C
2 papers
NM_000222.3
p.I563V
c.1687A>G
1 paper
NM_000222.3
p.E562G
c.1685A>G
5 papers
NM_000222.3
p.E562V
c.1685A>T
1 paper
NM_000222.3
p.I563L
c.1687A>T
1 paper
NM_000222.3
p.E562delFs
c.1686delG
1 paper
NM_000222.3
p.E562_Y570delFs
c.1686_1708del23
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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."