Varaico: Literature-Extracted Genetic Variants

LIN28B

40 papers

RefSeq Summary

The protein encoded by this gene belongs to the lin-28 family, which is characterized by the presence of a cold-shock domain and a pair of CCHC zinc finger domains. This gene is highly expressed in te...

Pfam Domains

CSDaa 30–102UCSC'Cold-shock' DNA-binding domain

zf-CCHCaa 127–144UCSCZinc knuckle

zf-CCHCaa 149–166UCSCZinc knuckle

Lin-28A-like_zf-CCHC_2aa 156–189UCSCLin-28A-like, second zinc knuckle

Gene Aliases

HGNC Name

lin-28 RNA binding posttranscriptional regulator B

HGNC Alias Symbols

FLJ16517; CSDD2

Papers

RefSeq ID

Protein change

DNA change

1–12 of 28 variants

6 papers

NM_001004317.4

p.H199R

c.596A>G

3 papers

NM_001004317.4

p.A162fs

c.484_485fs

2 papers

NM_001004317.4

p.R51Q

c.152G>A

2 papers

NM_001004317.4

p.C164W

c.492C>G

1 paper

NM_001004317.4

p.M1V

c.1A>G

1 paper

NM_001004317.4

p.K8N

c.24A>T

1 paper

NM_001004317.4

p.P20L

c.59C>T

1 paper

NM_001004317.4

p.E22G

c.65A>G

1 paper

NM_001004317.4

p.E22D

c.66G>C

1 paper

NM_001004317.4

p.E22D

c.66G>T

1 paper

NM_001004317.4

p.K78*

c.232A>T

1 paper

NM_001004317.4

p.E81D

c.243A>T