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Varaico: Literature-Extracted Genetic Variants

Include likely false extractions

Gene:LUZP4

Variant:p.S3W

LUZP4

36 papers

RefSeq Summary

This gene encodes a leucine-zipper protein that was first defined as a cancer testis antigens. The encoded protein is an RNA binding protein that interacts with the mRNA export receptor nuclear RNA ex...

Gene Aliases

HGNC Name

leucine zipper protein 4

HGNC Alias Symbols

HOM-TES-85; CT-8; CT28

Papers

Position

RefSeq ID

Protein change

DNA change

Pfam

gnomAD

Selected Variant

1 paper

chrX:115289767 C>G

NM_016383.5

p.S3W

c.8C>G

Exome: 0.0% (AC=524, hom=3)Genome: 0.0% (AC=25, hom=1)47 overlapping SVs

Surrounding Variants

1 paper

chrX:115289768 G>A

NM_016383.5

p.S3S

c.9G>A

Exome: 0.0% (AC=2, hom=0)Genome: n/a47 overlapping SVs

1 paper

chrX:115289782 C>T

NM_016383.5

p.T8M

c.23C>T

exact variant not in gnomAD47 overlapping SVs

1 paper

chrX:115289800 C>A

NM_016383.5

p.P14Q

c.41C>A

Exome: 0.0% (AC=1, hom=0)Genome: n/a47 overlapping SVs

1 paper

chrX:115289803 C>G

NM_016383.5

p.P15R

c.44C>G

Exome: 0.0% (AC=2, hom=0)Genome: 0.0% (AC=1, hom=0)47 overlapping SVs

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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."