Varaico: Literature-Extracted Genetic Variants

MSH2

3,750 papers

RefSeq Summary

This locus is frequently mutated in hereditary nonpolyposis colon cancer (HNPCC). When cloned, it was discovered to be a human homolog of the E. coli mismatch repair gene mutS, consistent with the cha...

Pfam Domains

MutS_Iaa 17–132UCSCMutS domain I

MutS_IIaa 145–290UCSCMutS domain II

MutS_IIIaa 305–609UCSCMutS domain III

MutS_IVaa 473–569UCSCMutS family domain IV

MutS_Vaa 665–852UCSCMutS domain V

Gene Aliases

HGNC Name

mutS homolog 2

HGNC Previous Symbol

COCA1

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_000251.3

p.A399insFs

c.1196dupC

Surrounding Variants

1 paper

NM_000251.3

p.A399T

c.1195G>A

1 paper

NM_000251.3

p.A399insFs

c.1195_1196ins7

3 papers

NM_000251.3

p.A399insFs

c.1196_1197dupCA

1 paper

NM_000251.3

p.A399S

c.1195G>T

1 paper

NM_000251.3

p.A399insFs

c.1196_1197ins7

1 paper

NM_000251.3

p.N400insFs

c.1198dupA

1 paper

NM_000251.3

p.A399V

c.1196C>T

1 paper

NM_000251.3

p.N400delFs

c.1198_1199delAA

2 papers

NM_000251.3

p.A398V

c.1193C>T

2 papers

NM_000251.3

p.N400fs

c.1198_1199fs

1 paper

NM_000251.3

p.N400D

c.1198A>G

1 paper

NM_000251.3

p.N400fs

c.1198_1199fs