Varaico: Literature-Extracted Genetic Variants

MSR1

203 papers

RefSeq Summary

This gene encodes the class A macrophage scavenger receptors, which include three different types (1, 2, 3) generated by alternative splicing of this gene. These receptors or isoforms are macrophage-s...

Pfam Domains

Macscav_recaa 121–169UCSCMacrophage scavenger receptor

Collagenaa 271–335UCSCCollagen triple helix repeat (20 copies)

SRCRaa 353–450UCSCScavenger receptor cysteine-rich domain

Gene Aliases

HGNC Name

macrophage scavenger receptor 1

HGNC Alias Symbols

SCARA1; CD204; SR-AI; SR-AII; SR-AIII; SR-A

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_138715.3

p.P301T

c.901C>A

Surrounding Variants

1 paper

NM_138715.3

p.G300C

c.898G>T

3 papers

NM_138715.3

p.P302L

c.905C>T

1 paper

NM_138715.3

p.D307Y

c.919G>T

1 paper

NM_138715.3

p.F313V

c.937T>G

1 paper

NM_138715.3

p.R317insFs

c.949_950insA

1 paper

NM_138715.3

p.G300Splc

c.898+1G>T

1 paper

NM_138715.3

p.G300C

c.898G>T

1 paper

NM_138715.3

p.G297S

c.889G>A

1 paper

NM_138715.3

p.P296L

c.887C>T

4 papers

NM_138715.3

p.G294E

c.881G>A

1 paper

NM_138715.3

p.G294*

c.880G>T

1 paper

NM_138715.3

p.R293fs

c.877_878fs