Varaico: Literature-Extracted Genetic Variants

MSR1

203 papers

RefSeq Summary

This gene encodes the class A macrophage scavenger receptors, which include three different types (1, 2, 3) generated by alternative splicing of this gene. These receptors or isoforms are macrophage-s...

Pfam Domains

Macscav_recaa 121–169UCSCMacrophage scavenger receptor

Collagenaa 271–335UCSCCollagen triple helix repeat (20 copies)

SRCRaa 353–450UCSCScavenger receptor cysteine-rich domain

Gene Aliases

HGNC Name

macrophage scavenger receptor 1

HGNC Alias Symbols

SCARA1; CD204; SR-AI; SR-AII; SR-AIII; SR-A

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_138715.3

p.L42P

c.125T>C

Surrounding Variants

7 papers

NM_138715.3

p.S41Y

c.122C>A

4 papers

NM_138715.3

p.S41T

c.121T>A

1 paper

NM_138715.3

p.L46L

c.138G>A

1 paper

NM_138715.3

p.S48T

c.142T>A

1 paper

NM_138715.3

p.P36S

c.106C>T

6 papers

NM_138715.3

p.P36A

c.106C>G

1 paper

NM_138715.3

p.A51T

c.151G>A

4 papers

NM_138715.3

p.I54V

c.160A>G

1 paper

NM_138715.3

p.L56I

c.166C>A

1 paper

NM_138715.3

p.N35Splc

c.104-23G>A

1 paper

NM_138715.3

p.V60M

c.178G>A

1 paper

NM_138715.3

p.F61V

c.181T>G