Varaico: Literature-Extracted Genetic Variants

MTA1

103 papers

RefSeq Summary

This gene encodes a protein that was identified in a screen for genes expressed in metastatic cells, specifically, mammary adenocarcinoma cell lines. Expression of this gene has been correlated with t...

Pfam Domains

BAHaa 4–164UCSCBAH domain

ELM2aa 167–219UCSCELM2 domain

Myb_DNA-bindingaa 285–331UCSCMyb-like DNA-binding domain

GATAaa 393–430UCSCGATA zinc finger

MTA_R1aa 464–541UCSCMTA R1 domain

Gene Aliases

HGNC Name

metastasis associated 1

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_004689.4

p.F109I

c.325T>A

Surrounding Variants

1 paper

NM_004689.4

p.L110L

c.330C>A

1 paper

NM_004689.4

p.Q102H

c.306G>C

1 paper

NM_004689.4

p.L117L

c.349C>T

1 paper

NM_004689.4

p.K100R

c.299A>G

2 papers

NM_004689.4

p.K98R

c.293A>G

1 paper

NM_004689.4

p.E91K

c.271G>A

1 paper

NM_004689.4

p.R123Splc

c.368+45G>A

1 paper

NM_004689.4

p.C126Y

c.377G>A

1 paper

NM_004689.4

p.S127S

c.381C>T

1 paper

NM_004689.4

p.K138Q

c.412A>C

1 paper

NM_004689.4

p.G81Splc

c.242-81G>A

1 paper

NM_004689.4

p.G81A

c.242G>C