Varaico: Literature-Extracted Genetic Variants

MTA1

103 papers

RefSeq Summary

This gene encodes a protein that was identified in a screen for genes expressed in metastatic cells, specifically, mammary adenocarcinoma cell lines. Expression of this gene has been correlated with t...

Pfam Domains

BAHaa 4–164UCSCBAH domain

ELM2aa 167–219UCSCELM2 domain

Myb_DNA-bindingaa 285–331UCSCMyb-like DNA-binding domain

GATAaa 393–430UCSCGATA zinc finger

MTA_R1aa 464–541UCSCMTA R1 domain

Gene Aliases

HGNC Name

metastasis associated 1

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_004689.4

p.T178delFs

c.533delC

Surrounding Variants

1 paper

NM_004689.4

p.R172R

c.514C>A

1 paper

NM_004689.4

p.G170E

c.509G>A

1 paper

NM_004689.4

p.K158fs

c.472_473fs

1 paper

NM_004689.4

p.Y153H

c.457T>C

1 paper

NM_004689.4

p.F148S

c.443T>C

1 paper

NM_004689.4

p.K138Q

c.412A>C

1 paper

NM_004689.4

p.S127S

c.381C>T

1 paper

NM_004689.4

p.C126Y

c.377G>A

1 paper

NM_004689.4

p.A201T

c.601G>A

2 papers

NM_004689.4

p.P204P

c.612A>T

1 paper

NM_004689.4

p.L205F

c.613C>T

1 paper

NM_004689.4

p.R123Splc

c.368+45G>A