Varaico: Literature-Extracted Genetic Variants

MTA1

103 papers

RefSeq Summary

This gene encodes a protein that was identified in a screen for genes expressed in metastatic cells, specifically, mammary adenocarcinoma cell lines. Expression of this gene has been correlated with t...

Pfam Domains

BAHaa 4–164UCSCBAH domain

ELM2aa 167–219UCSCELM2 domain

Myb_DNA-bindingaa 285–331UCSCMyb-like DNA-binding domain

GATAaa 393–430UCSCGATA zinc finger

MTA_R1aa 464–541UCSCMTA R1 domain

Gene Aliases

HGNC Name

metastasis associated 1

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_004689.4

p.D551A

c.1652A>C

Surrounding Variants

1 paper

NM_004689.4

p.D551delins

c.1652delinsACCCCCC

1 paper

NM_004689.4

p.D551N

c.1651G>A

1 paper

NM_004689.4

p.D551delFs

c.1652delA

1 paper

NM_004689.4

p.D551fs

c.1651_1652fs

1 paper

NM_004689.4

p.K549Q

c.1645A>C

3 papers

NM_004689.4

p.P547A

c.1639C>G

1 paper

NM_004689.4

p.R546P

c.1637G>C

1 paper

NM_004689.4

p.V559M

c.1675G>A

1 paper

NM_004689.4

p.E542_T543ins4

c.1626_1627ins12

1 paper

NM_004689.4

p.T564M

c.1691C>T

1 paper

NM_004689.4

p.H588L

c.1763A>T

1 paper

NM_004689.4

p.R598C

c.1792C>T