Varaico: Literature-Extracted Genetic Variants

MTA1

103 papers

RefSeq Summary

This gene encodes a protein that was identified in a screen for genes expressed in metastatic cells, specifically, mammary adenocarcinoma cell lines. Expression of this gene has been correlated with t...

Pfam Domains

BAHaa 4–164UCSCBAH domain

ELM2aa 167–219UCSCELM2 domain

Myb_DNA-bindingaa 285–331UCSCMyb-like DNA-binding domain

GATAaa 393–430UCSCGATA zinc finger

MTA_R1aa 464–541UCSCMTA R1 domain

Gene Aliases

HGNC Name

metastasis associated 1

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_004689.4

p.R669H

c.2006G>A

Surrounding Variants

1 paper

NM_004689.4

p.T677N

c.2030C>A

1 paper

NM_004689.4

p.P700del1

c.2098_2100delCCA

2 papers

NM_004689.4

p.V706I

c.2116G>A

1 paper

NM_004689.4

p.D652D

c.1956C>T

4 papers

NM_004689.4

p.D652N

c.1954G>A

1 paper

NM_004689.4

p.V712A

c.2135T>C

1 paper

NM_004689.4

p.V712insFs

c.2135_2136ins4

1 paper

NM_004689.4

p.R647W

c.1939C>T

1 paper

NM_004689.4

p.G638delFs

c.1913delG

1 paper

NM_004689.4

p.S627fs

c.1879_1880fs

1 paper

NM_004689.4

p.K626insFs

c.1877dupA

1 paper

NM_004689.4

p.K626delFs

c.1877delA