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Varaico: Literature-Extracted Genetic Variants

Include likely false extractions

Gene:OMP

OMP

26 papers

RefSeq Summary

Olfactory marker protein is uniquely associated with the mature olfactory receptor neurons in many vertebrate species from fish to man. The OMP gene structure and protein sequence are highly conserve...

Pfam Domains

Olfactory_markaa 11–151UCSCOlfactory marker protein

Gene Aliases

HGNC Name

olfactory marker protein

Papers

Position

RefSeq ID

Protein change

DNA change

Pfam

gnomAD

2 papers

chr11:77102985 C>G

NM_006189.1

p.A49G

c.146C>G

Olfactory_mark

exact variant not in gnomAD33 overlapping SVs

1 paper

chr11:77102915 C>T

NM_006189.1

p.R26W

c.76C>T

Olfactory_mark

Exome: 5.5% (AC=80789, hom=2960)Genome: 5.3% (AC=8045, hom=409)33 overlapping SVs

1 paper

chr11:77102941 G>A

NM_006189.1

p.Q34Q

c.102G>A

Olfactory_mark

exact variant not in gnomAD33 overlapping SVs

1 paper

chr11:77102945 G>A

NM_006189.1

p.G36R

c.106G>A

Olfactory_mark

Exome: 0.1% (AC=1473, hom=20)Genome: 0.9% (AC=1431, hom=25)33 overlapping SVs

1 paper

chr11:77102995 G>A

NM_006189.1

p.V52V

c.156G>A

Olfactory_mark

Exome: 0.0% (AC=7, hom=0)Genome: n/a33 overlapping SVs

1 paper

chr11:77103005 A>C

NM_006189.1

p.N56H

c.166A>C

Olfactory_mark

Exome: 0.0% (AC=4, hom=0)Genome: n/a33 overlapping SVs

1 paper

chr11:77103064 G>A

NM_006189.1

p.P75P

c.225G>A

Olfactory_mark

Exome: 21.1% (AC=307650, hom=33198)Genome: 20.7% (AC=31556, hom=3416)33 overlapping SVs

1 paper

chr11:77103246 G>T

NM_006189.1

p.R136L

c.407G>T

Olfactory_mark

Exome: 0.0% (AC=7, hom=0)Genome: 0.0% (AC=1, hom=0)33 overlapping SVs

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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."