Varaico: Literature-Extracted Genetic Variants

PCDHB1

70 papers

RefSeq Summary

This gene is a member of the protocadherin beta gene cluster, one of three related gene clusters tandemly linked on chromosome five. The gene clusters demonstrate an unusual genomic organization simil...

Pfam Domains

Cadherin_2aa 30–112UCSCCadherin-like

Cadherinaa 138–233UCSCCadherin domain

Cadherinaa 247–338UCSCCadherin domain

Cadherinaa 353–443UCSCCadherin domain

Cadherinaa 457–553UCSCCadherin domain

Cadherinaa 577–664UCSCCadherin domain

Gene Aliases

HGNC Name

protocadherin beta 1

HGNC Alias Symbol

PCDH-BETA1

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_013340.4

p.T171fs

c.511_512fs

Surrounding Variants

1 paper

NM_013340.4

p.Y170D

c.508T>G

1 paper

NM_013340.4

p.S173I

c.518G>T

1 paper

NM_013340.4

p.N175S

c.524A>G

1 paper

NM_013340.4

p.D159N

c.475G>A

1 paper

NM_013340.4

p.P153T

c.457C>A

1 paper

NM_013340.4

p.P153fs

c.457_458fs

1 paper

NM_013340.4

p.K136N

c.408G>C

1 paper

NM_013340.4

p.K136N

c.408G>T

1 paper

NM_013340.4

p.V208I

c.622G>A

1 paper

NM_013340.4

p.P221S

c.661C>T

1 paper

NM_013340.4

p.R118_E120insFs

c.354_358dup5

1 paper

NM_013340.4

p.E112D

c.336G>C