Varaico: Literature-Extracted Genetic Variants

PKD1

1,465 papers

RefSeq Summary

This gene encodes a member of the polycystin protein family. The encoded glycoprotein contains a large N-terminal extracellular region, multiple transmembrane domains and a cytoplasmic C-tail. It is a...

Pfam Domains

LRR_8aa 69–127UCSCLeucine rich repeat

WSCaa 180–261UCSCWSC domain

PKDaa 274–352UCSCPKD domain

Lectin_Caa 425–532UCSCLectin C-type domain

PKDaa 934–1013UCSCPKD domain

PKDaa 1021–1122UCSCPKD domain

Gene Aliases

HGNC Name

polycystin 1, transient receptor potential channel interacting

HGNC Alias Symbols

PBP; Pc-1; TRPP1

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_001009944.3

p.L1890fs

c.5668_5669fs

Surrounding Variants

2 papers

NM_001009944.3

p.L1890R

c.5669T>G

1 paper

NM_001009944.3

p.E1884_V1891del0

c.5651_5671del21

1 paper

NM_001009944.3

p.G1889delFs

c.5666delC

1 paper

NM_001009944.3

p.G1889V

c.5666G>T

1 paper

NM_001009944.3

p.V1888_V1891del4

c.5662_5672del12

1 paper

NM_001009944.3

p.G1889S

c.5665G>A

1 paper

NM_001009944.3

p.G1889fs

c.5665_5666fs

1 paper

NM_001009944.3

p.L1892insFs

c.5676dupG

1 paper

NM_001009944.3

p.L1892delFs

c.5676delC

1 paper

NM_001009944.3

p.W1893fs

c.5677_5678fs

1 paper

NM_001009944.3

p.W1893*

c.5678G>A

1 paper

NM_001009944.3

p.W1893*

c.5679G>A