Varaico: Literature-Extracted Genetic Variants

PMS2

2,219 papers

RefSeq Summary

The protein encoded by this gene is a key component of the mismatch repair system that functions to correct DNA mismatches and small insertions and deletions that can occur during DNA replication and ...

Pfam Domains

HATPase_c_3aa 33–162UCSCHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase

DNA_mis_repairaa 114–228UCSCDNA mismatch repair protein, C-terminal domain

DNA_mis_repairaa 249–363UCSCDNA mismatch repair protein, C-terminal domain

MutL_Caa 544–687UCSCMutL C terminal dimerisation domain

Gene Aliases

HGNC Name

PMS1 homolog 2, mismatch repair system component

HGNC Previous Symbol

PMSL2

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

12 papers

NM_000535.7

p.A636P

c.1906G>C

Surrounding Variants

1 paper

NM_000535.7

p.E635insFs

c.1904dupA

2 papers

NM_000535.7

p.E635_A636Fs

c.1905_1906delinsTFs

1 paper

NM_000535.7

p.A636fs

c.1906_1907fs

1 paper

NM_000535.7

p.A636V

c.1907C>T

2 papers

NM_000535.7

p.E635fs

c.1903_1904fs

1 paper

NM_000535.7

p.E635V

c.1904A>T

1 paper

NM_000535.7

p.E635G

c.1904A>G

1 paper

NM_000535.7

p.A636delFs

c.1907delG

2 papers

NM_000535.7

p.E635*

c.1903G>T

1 paper

NM_000535.7

p.H634delFs

c.1902delA

1 paper

NM_000535.7

p.H634delFs

c.1901_1902delAT

1 paper

NM_000535.7

p.Q631_H634del4

c.1891_1901del12