Varaico: Literature-Extracted Genetic Variants

PMS2

2,219 papers

RefSeq Summary

The protein encoded by this gene is a key component of the mismatch repair system that functions to correct DNA mismatches and small insertions and deletions that can occur during DNA replication and ...

Pfam Domains

HATPase_c_3aa 33–162UCSCHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase

DNA_mis_repairaa 114–228UCSCDNA mismatch repair protein, C-terminal domain

DNA_mis_repairaa 249–363UCSCDNA mismatch repair protein, C-terminal domain

MutL_Caa 544–687UCSCMutL C terminal dimerisation domain

Gene Aliases

HGNC Name

PMS1 homolog 2, mismatch repair system component

HGNC Previous Symbol

PMSL2

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_000535.7

p.C551insFs

c.1652_1653ins5

Surrounding Variants

2 papers

NM_000535.7

p.C551*

c.1653C>A

1 paper

NM_000535.7

p.H552Y

c.1654C>T

2 papers

NM_000535.7

p.D550delFs

c.1650delG

1 paper

NM_000535.7

p.D550delFs

c.1649_1650delGT

1 paper

NM_000535.7

p.C551fs

c.1651_1652fs

1 paper

NM_000535.7

p.H552Q

c.1656T>G

2 papers

NM_000535.7

p.H552H

c.1656T>C

1 paper

NM_000535.7

p.H552Q

c.1656T>A

2 papers

NM_000535.7

p.D550G

c.1649A>G

1 paper

NM_000535.7

p.D550delFs

c.1648delC

1 paper

NM_000535.7

p.D550H

c.1648G>C

1 paper

NM_000535.7

p.H552insFs

c.1656dupT