Varaico: Literature-Extracted Genetic Variants

PMS2

2,219 papers

RefSeq Summary

The protein encoded by this gene is a key component of the mismatch repair system that functions to correct DNA mismatches and small insertions and deletions that can occur during DNA replication and ...

Pfam Domains

HATPase_c_3aa 33–162UCSCHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase

DNA_mis_repairaa 114–228UCSCDNA mismatch repair protein, C-terminal domain

DNA_mis_repairaa 249–363UCSCDNA mismatch repair protein, C-terminal domain

MutL_Caa 544–687UCSCMutL C terminal dimerisation domain

Gene Aliases

HGNC Name

PMS1 homolog 2, mismatch repair system component

HGNC Previous Symbol

PMSL2

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_000535.7

p.F290_I292delFs

c.870_874del5

Surrounding Variants

4 papers

NM_000535.7

p.I292M

c.876C>G

1 paper

NM_000535.7

p.F291_I292delFs

c.873_874delTA

1 paper

NM_000535.7

p.I292F

c.874A>T

4 papers

NM_000535.7

p.F291delFs

c.873delA

1 paper

NM_000535.7

p.N293fs

c.877_878fs

3 papers

NM_000535.7

p.I292_N293insFs

c.876_877insC

1 paper

NM_000535.7

p.I292delFs

c.876delG

1 paper

NM_000535.7

p.F291_I292delFs

c.873_876del4

2 papers

NM_000535.7

p.N293S

c.878A>G

1 paper

NM_000535.7

p.F290insFs

c.870dupC

1 paper

NM_000535.7

p.F291V

c.871T>G

1 paper

NM_000535.7

p.F291I

c.871T>A