Varaico: Literature-Extracted Genetic Variants

POGZ

250 papers

RefSeq Summary

The protein encoded by this gene appears to be a zinc finger protein containing a transposase domain at the C-terminus. This protein was found to interact with the transcription factor SP1 in a yeast ...

Pfam Domains

zf-POGZaa 749–791UCSCPOGZ-like double zinc finger

zf-C2H2_Z280C_Daa 811–847UCSCZ280C/D-like C2H2 zinc finger

HTH_Tnp_Tc5aa 1024–1085UCSCTc5 transposase DNA-binding domain

DDE_1aa 1154–1302UCSCDDE superfamily endonuclease

Gene Aliases

HGNC Name

pogo transposable element derived with ZNF domain

HGNC Alias Symbols

KIAA0461; ZNF635; ZNF280E

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

3 papers

NM_015100.4

p.E1362D

c.4086A>C

Surrounding Variants

3 papers

NM_015100.4

p.E1362D

c.4086A>T

1 paper

NM_015100.4

p.H1363R

c.4088A>G

1 paper

NM_015100.4

p.E1365D

c.4095G>T

1 paper

NM_015100.4

p.E1365D

c.4095G>C

1 paper

NM_015100.4

p.Q1356K

c.4066C>A

1 paper

NM_015100.4

p.R1370*

c.4108C>T

1 paper

NM_015100.4

p.S1352insFs

c.4054dupT

2 papers

NM_015100.4

p.E1348Q

c.4042G>C

1 paper

NM_015100.4

p.A1343insFs

c.4027dupG

1 paper

NM_015100.4

p.H1385N

c.4153C>A

1 paper

NM_015100.4

p.E1393*

c.4177G>T

1 paper

NM_015100.4

p.S1327G

c.3979A>G