Varaico: Literature-Extracted Genetic Variants

POGZ

250 papers

RefSeq Summary

The protein encoded by this gene appears to be a zinc finger protein containing a transposase domain at the C-terminus. This protein was found to interact with the transcription factor SP1 in a yeast ...

Pfam Domains

zf-POGZaa 749–791UCSCPOGZ-like double zinc finger

zf-C2H2_Z280C_Daa 811–847UCSCZ280C/D-like C2H2 zinc finger

HTH_Tnp_Tc5aa 1024–1085UCSCTc5 transposase DNA-binding domain

DDE_1aa 1154–1302UCSCDDE superfamily endonuclease

Gene Aliases

HGNC Name

pogo transposable element derived with ZNF domain

HGNC Alias Symbols

KIAA0461; ZNF635; ZNF280E

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

2 papers

NM_015100.4

p.I1312delFs

c.3936delA

Surrounding Variants

2 papers

NM_015100.4

p.I1312fs

c.3934_3935fs

1 paper

NM_015100.4

p.C1315W

c.3945T>G

1 paper

NM_015100.4

p.V1308insFs

c.3922dupG

1 paper

NM_015100.4

p.Q1320E

c.3958C>G

3 papers

NM_015100.4

p.L1305R

c.3914T>G

1 paper

NM_015100.4

p.V1303_W1304delFs

c.3908_3911del4

1 paper

NM_015100.4

p.V1303fs

c.3907_3908fs

1 paper

NM_015100.4

p.V1303F

c.3907G>T

1 paper

NM_015100.4

p.Q1299insFs

c.3895dupC

1 paper

NM_015100.4

p.S1327G

c.3979A>G

1 paper

NM_015100.4

p.T1290insFs

c.3868dupA

1 paper

NM_015100.4

p.A1288V

c.3863C>T