Varaico: Literature-Extracted Genetic Variants

POGZ

250 papers

RefSeq Summary

The protein encoded by this gene appears to be a zinc finger protein containing a transposase domain at the C-terminus. This protein was found to interact with the transcription factor SP1 in a yeast ...

Pfam Domains

zf-POGZaa 749–791UCSCPOGZ-like double zinc finger

zf-C2H2_Z280C_Daa 811–847UCSCZ280C/D-like C2H2 zinc finger

HTH_Tnp_Tc5aa 1024–1085UCSCTc5 transposase DNA-binding domain

DDE_1aa 1154–1302UCSCDDE superfamily endonuclease

Gene Aliases

HGNC Name

pogo transposable element derived with ZNF domain

HGNC Alias Symbols

KIAA0461; ZNF635; ZNF280E

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_015100.4

p.R1285Q

c.3854G>A

Surrounding Variants

10 papers

NM_015100.4

p.Q1283*

c.3847C>T

1 paper

NM_015100.4

p.A1288V

c.3863C>T

1 paper

NM_015100.4

p.T1290insFs

c.3868dupA

1 paper

NM_015100.4

p.K1279delFs

c.3837delT

1 paper

NM_015100.4

p.K1279fs

c.3835_3836fs

4 papers

NM_015100.4

p.H1277_K1278insC

c.3829_3833ins3

1 paper

NM_015100.4

p.L1276P

c.3827T>C

1 paper

NM_015100.4

p.Q1299insFs

c.3895dupC

1 paper

NM_015100.4

p.V1303F

c.3907G>T

1 paper

NM_015100.4

p.L1264_C1267del0

c.3792_3800del9

1 paper

NM_015100.4

p.V1303fs

c.3907_3908fs

1 paper

NM_015100.4

p.V1303_W1304delFs

c.3908_3911del4