Varaico: Literature-Extracted Genetic Variants

POGZ

250 papers

RefSeq Summary

The protein encoded by this gene appears to be a zinc finger protein containing a transposase domain at the C-terminus. This protein was found to interact with the transcription factor SP1 in a yeast ...

Pfam Domains

zf-POGZaa 749–791UCSCPOGZ-like double zinc finger

zf-C2H2_Z280C_Daa 811–847UCSCZ280C/D-like C2H2 zinc finger

HTH_Tnp_Tc5aa 1024–1085UCSCTc5 transposase DNA-binding domain

DDE_1aa 1154–1302UCSCDDE superfamily endonuclease

Gene Aliases

HGNC Name

pogo transposable element derived with ZNF domain

HGNC Alias Symbols

KIAA0461; ZNF635; ZNF280E

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_015100.4

p.R1211_Q1214del0

c.3633_3641del9

Surrounding Variants

1 paper

NM_015100.4

p.T1217fs

c.3649_3650fs

1 paper

NM_015100.4

p.T1217delFs

c.3650_3651delTG

5 papers

NM_015100.4

p.R1211*

c.3631C>T

4 papers

NM_015100.4

p.T1210A

c.3628A>G

3 papers

NM_015100.4

p.T1210P

c.3628A>C

1 paper

NM_015100.4

p.Q1220R

c.3659A>G

1 paper

NM_015100.4

p.W1208fs

c.3622_3623fs

1 paper

NM_015100.4

p.Q1220insFs

c.3659dupA

1 paper

NM_015100.4

p.L1207delFs

c.3621delC

1 paper

NM_015100.4

p.S1222R

c.3664A>C

1 paper

NM_015100.4

p.S1222R

c.3666C>G

1 paper

NM_015100.4

p.S1222R

c.3666C>A