Varaico: Literature-Extracted Genetic Variants

POGZ

250 papers

RefSeq Summary

The protein encoded by this gene appears to be a zinc finger protein containing a transposase domain at the C-terminus. This protein was found to interact with the transcription factor SP1 in a yeast ...

Pfam Domains

zf-POGZaa 749–791UCSCPOGZ-like double zinc finger

zf-C2H2_Z280C_Daa 811–847UCSCZ280C/D-like C2H2 zinc finger

HTH_Tnp_Tc5aa 1024–1085UCSCTc5 transposase DNA-binding domain

DDE_1aa 1154–1302UCSCDDE superfamily endonuclease

Gene Aliases

HGNC Name

pogo transposable element derived with ZNF domain

HGNC Alias Symbols

KIAA0461; ZNF635; ZNF280E

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

7 papers

NM_015100.4

p.E1203fs

c.3607_3608fs

Surrounding Variants

1 paper

NM_015100.4

p.E1203*

c.3607G>T

1 paper

NM_015100.4

p.D1202_E1203insFs

c.3606_3607ins8

6 papers

NM_015100.4

p.S1200_E1203insFs

c.3600_3607dup8

1 paper

NM_015100.4

p.E1203fs

c.3607_3608fs

1 paper

NM_207171.2

p.M1152_E1153delFs

c.3456_3457delCC

4 papers

NM_015100.4

p.S1197_G1198delFs

c.3591_3592delCA

1 paper

NM_015100.4

p.L1207delFs

c.3621delC

1 paper

NM_015100.4

p.W1208fs

c.3622_3623fs

4 papers

NM_015100.4

p.S1197fs

c.3589_3590fs

1 paper

NM_015100.4

p.E1196*

c.3586G>T

1 paper

NM_015100.4

p.E1196K

c.3586G>A

4 papers

NM_015100.4

p.T1210A

c.3628A>G