Varaico: Literature-Extracted Genetic Variants

POGZ

250 papers

RefSeq Summary

The protein encoded by this gene appears to be a zinc finger protein containing a transposase domain at the C-terminus. This protein was found to interact with the transcription factor SP1 in a yeast ...

Pfam Domains

zf-POGZaa 749–791UCSCPOGZ-like double zinc finger

zf-C2H2_Z280C_Daa 811–847UCSCZ280C/D-like C2H2 zinc finger

HTH_Tnp_Tc5aa 1024–1085UCSCTc5 transposase DNA-binding domain

DDE_1aa 1154–1302UCSCDDE superfamily endonuclease

Gene Aliases

HGNC Name

pogo transposable element derived with ZNF domain

HGNC Alias Symbols

KIAA0461; ZNF635; ZNF280E

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_015100.4

p.V1169V

c.3507C>G

Surrounding Variants

1 paper

NM_015100.4

p.V1169_T1172del0

c.3507_3515del9

1 paper

NM_015100.4

p.V1160del1

c.3478_3479delGAC

1 paper

NM_015100.4

p.V1160V

c.3480C>G

1 paper

NM_015100.4

p.V1159_V1160del1

c.3477_3479delACT

1 paper

NM_015100.4

p.D1181_Q1182insAT

c.3541_3545ins6

7 papers

NM_015100.4

p.M1180_D1181del2

c.3538_3542del6

1 paper

NM_015100.4

p.P1155T

c.3463C>A

1 paper

NM_015100.4

p.E1154fs

c.3460_3461fs

6 papers

NM_015100.4

p.E1154fs

c.3460_3461fs

8 papers

NM_015100.4

p.T1152_G1153delFs

c.3456_3457delCT

1 paper

NM_015100.4

p.T1152delFs

c.3455_3456delTG

1 paper

NM_015100.4

p.T1152_G1153insA

c.3454_3458ins3