Varaico: Literature-Extracted Genetic Variants

POGZ

250 papers

RefSeq Summary

The protein encoded by this gene appears to be a zinc finger protein containing a transposase domain at the C-terminus. This protein was found to interact with the transcription factor SP1 in a yeast ...

Pfam Domains

zf-POGZaa 749–791UCSCPOGZ-like double zinc finger

zf-C2H2_Z280C_Daa 811–847UCSCZ280C/D-like C2H2 zinc finger

HTH_Tnp_Tc5aa 1024–1085UCSCTc5 transposase DNA-binding domain

DDE_1aa 1154–1302UCSCDDE superfamily endonuclease

Gene Aliases

HGNC Name

pogo transposable element derived with ZNF domain

HGNC Alias Symbols

KIAA0461; ZNF635; ZNF280E

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_015100.4

p.L1117fs

c.3349_3350fs

Surrounding Variants

1 paper

NM_015100.4

p.L1117delFs

c.3350delA

6 papers

NM_015100.4

p.P1118delFs

c.3354delG

4 papers

NM_015100.4

p.L1119fs

c.3355_3356fs

1 paper

NM_145796.4

p.Q1014*

c.3040C>T

1 paper

NM_015100.4

p.F1107_V1108insFs

c.3321_3322ins8

1 paper

NM_015100.4

p.V1108Fs

c.3322delinsTGATGACGAFs

1 paper

NM_015100.4

p.F1107fs

c.3319_3320fs

4 papers

NM_015100.4

p.F1104delFs

c.3312delG

1 paper

NM_015100.4

p.F1104fs

c.3310_3311fs

2 papers

NM_015100.4

p.L1103_F1104delFs

c.3309_3310delAG

4 papers

NM_015100.4

p.F1104fs

c.3310_3311fs

2 papers

NM_015100.4

p.L1103delFs

c.3308delA