Varaico: Literature-Extracted Genetic Variants

POGZ

250 papers

RefSeq Summary

The protein encoded by this gene appears to be a zinc finger protein containing a transposase domain at the C-terminus. This protein was found to interact with the transcription factor SP1 in a yeast ...

Pfam Domains

zf-POGZaa 749–791UCSCPOGZ-like double zinc finger

zf-C2H2_Z280C_Daa 811–847UCSCZ280C/D-like C2H2 zinc finger

HTH_Tnp_Tc5aa 1024–1085UCSCTc5 transposase DNA-binding domain

DDE_1aa 1154–1302UCSCDDE superfamily endonuclease

Gene Aliases

HGNC Name

pogo transposable element derived with ZNF domain

HGNC Alias Symbols

KIAA0461; ZNF635; ZNF280E

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

10 papers

NM_015100.4

p.Q1042R

c.3125A>G

Surrounding Variants

1 paper

NM_145796.4

p.Q946delFs

c.2836delG

11 papers

NM_015100.4

p.E1040K

c.3118G>A

1 paper

NM_015100.4

p.R1039H

c.3116G>A

8 papers

NM_015100.4

p.Q1038R

c.3113A>G

6 papers

NM_015100.4

p.E1047*

c.3139G>T

1 paper

NM_015100.4

p.L1050F

c.3150G>T

1 paper

NM_015100.4

p.L1050F

c.3150G>C

1 paper

NM_015100.4

p.F1051L

c.3151T>C

1 paper

NM_015100.4

p.E1033E

c.3099G>A

1 paper

NM_015100.4

p.L1050_F1051delFs

c.3150_3151delAC

1 paper

NM_015100.4

p.E1033K

c.3097G>A

1 paper

NM_015100.4

p.F1051L

c.3153C>G