Varaico: Literature-Extracted Genetic Variants

POGZ

250 papers

RefSeq Summary

The protein encoded by this gene appears to be a zinc finger protein containing a transposase domain at the C-terminus. This protein was found to interact with the transcription factor SP1 in a yeast ...

Pfam Domains

zf-POGZaa 749–791UCSCPOGZ-like double zinc finger

zf-C2H2_Z280C_Daa 811–847UCSCZ280C/D-like C2H2 zinc finger

HTH_Tnp_Tc5aa 1024–1085UCSCTc5 transposase DNA-binding domain

DDE_1aa 1154–1302UCSCDDE superfamily endonuclease

Gene Aliases

HGNC Name

pogo transposable element derived with ZNF domain

HGNC Alias Symbols

KIAA0461; ZNF635; ZNF280E

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_015100.4

p.C939fs

c.2815_2816fs

Surrounding Variants

4 papers

NM_015100.4

p.N941fs

c.2821_2822fs

5 papers

NM_015100.4

p.L940_N941insFs

c.2820_2821insG

4 papers

NM_015100.4

p.N941fs

c.2821_2822fs

1 paper

NM_015100.4

p.L940_V942delFs

c.2819_2826del8

1 paper

NM_015100.4

p.G936*

c.2806G>T

1 paper

NM_015100.4

p.E935fs

c.2803_2804fs

1 paper

NM_015100.4

p.C939_D944delFs

c.2817_2830del14

3 papers

NM_015100.4

p.Q945*

c.2833C>T

3 papers

NM_015100.4

p.D946fs

c.2836_2837fs

6 papers

NM_015100.4

p.D946delFs

c.2836delC

1 paper

NM_015100.4

p.D946fs

c.2836_2837fs

1 paper

NM_015100.4

p.P930L

c.2789C>T