Varaico: Literature-Extracted Genetic Variants

POGZ

250 papers

RefSeq Summary

The protein encoded by this gene appears to be a zinc finger protein containing a transposase domain at the C-terminus. This protein was found to interact with the transcription factor SP1 in a yeast ...

Pfam Domains

zf-POGZaa 749–791UCSCPOGZ-like double zinc finger

zf-C2H2_Z280C_Daa 811–847UCSCZ280C/D-like C2H2 zinc finger

HTH_Tnp_Tc5aa 1024–1085UCSCTc5 transposase DNA-binding domain

DDE_1aa 1154–1302UCSCDDE superfamily endonuclease

Gene Aliases

HGNC Name

pogo transposable element derived with ZNF domain

HGNC Alias Symbols

KIAA0461; ZNF635; ZNF280E

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

3 papers

NM_015100.4

p.S910*

c.2729C>G

Surrounding Variants

4 papers

NM_015100.4

p.S910*

c.2729C>A

1 paper

NM_207171.2

p.P858delFs

c.2574delT

4 papers

NM_015100.4

p.P906S

c.2716C>T

1 paper

NM_015100.4

p.A905fs

c.2713_2714fs

1 paper

NM_015100.4

p.L904insFs

c.2712dupA

1 paper

NM_015100.4

p.T916fs

c.2746_2747fs

1 paper

NM_015100.4

p.L904fs

c.2710_2711fs

10 papers

NM_015100.4

p.L904*

c.2711T>G

9 papers

NM_015100.4

p.L904*

c.2711T>A

1 paper

NM_015100.4

p.L901_L904delFs

c.2703_2710del8

1 paper

NM_015100.4

p.T916delFs

c.2746delT

3 papers

NM_015100.4

p.P903delFs

c.2709delG