Varaico: Literature-Extracted Genetic Variants

PRDM1

485 papers

RefSeq Summary

This gene encodes a protein that acts as a repressor of beta-interferon gene expression. The protein binds specifically to the PRDI (positive regulatory domain I element) of the beta-IFN gene promoter...

Pfam Domains

PRDM2_PRaa 87–211UCSCPR domain zinc finger protein 2, PR domain

zf-C2H2aa 575–597UCSCZinc finger, C2H2 type

zf-C2H2aa 603–625UCSCZinc finger, C2H2 type

zf-C2H2_6aa 631–656UCSCC2H2-type zinc finger

zf-C2H2aa 659–681UCSCZinc finger, C2H2 type

Gene Aliases

HGNC Name

PR/SET domain 1

HGNC Previous Symbol

BLIMP1

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

3 papers

NM_001198.4

p.W67*

c.201G>A

Surrounding Variants

3 papers

NM_001198.4

p.W67*

c.200G>A

1 paper

NM_001198.4

p.P66H

c.197C>A

1 paper

NM_001198.4

p.P66S

c.196C>T

1 paper

NM_001198.4

p.N63S

c.188A>G

9 papers

NM_001198.4

p.G74S

c.220G>A

1 paper

NM_001198.4

p.G74D

c.221G>A

2 papers

NM_001198.4

p.Y60*

c.180C>A

2 papers

NM_001198.4

p.Y60*

c.180C>G

1 paper

NM_001198.4

p.T75_E80insFs

c.224_240dup17

1 paper

NM_001198.4

p.T75_S76insFs

c.225_226insT

1 paper

NM_001198.4

p.Y60N

c.178T>A

1 paper

NM_001198.4

p.Y60insFs

c.178_179insA