Varaico: Literature-Extracted Genetic Variants

PRDM1

485 papers

RefSeq Summary

This gene encodes a protein that acts as a repressor of beta-interferon gene expression. The protein binds specifically to the PRDI (positive regulatory domain I element) of the beta-IFN gene promoter...

Pfam Domains

PRDM2_PRaa 87–211UCSCPR domain zinc finger protein 2, PR domain

zf-C2H2aa 575–597UCSCZinc finger, C2H2 type

zf-C2H2aa 603–625UCSCZinc finger, C2H2 type

zf-C2H2_6aa 631–656UCSCC2H2-type zinc finger

zf-C2H2aa 659–681UCSCZinc finger, C2H2 type

Gene Aliases

HGNC Name

PR/SET domain 1

HGNC Previous Symbol

BLIMP1

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_001198.4

p.T534S

c.1600A>T

Surrounding Variants

2 papers

NM_001198.4

p.A533T

c.1597G>A

1 paper

NM_001198.4

p.K532Q

c.1594A>C

1 paper

NM_001198.4

p.A539P

c.1615G>C

1 paper

NM_001198.4

p.P541H

c.1622C>A

1 paper

NM_001198.4

p.S542N

c.1625G>A

1 paper

NM_001198.4

p.S543_D544insGTA

c.1627_1631ins9

2 papers

NM_001198.4

p.T524R

c.1571C>G

1 paper

NM_001198.4

p.T524M

c.1571C>T

1 paper

NM_001198.4

p.D544N

c.1630G>A

1 paper

NM_001198.4

p.E545_A546del2

c.1633_1637del6

2 papers

NM_001198.4

p.E545K

c.1633G>A

1 paper

NM_001198.4

p.E545A

c.1634A>C