Varaico: Literature-Extracted Genetic Variants

PRDM16

388 papers

RefSeq Summary

The reciprocal translocation t(1;3)(p36;q21) occurs in a subset of myelodysplastic syndrome (MDS) and acute myeloid leukemia (AML). This gene is located near the 1p36.3 breakpoint and has been shown t...

Pfam Domains

PRDM2_PRaa 84–216UCSCPR domain zinc finger protein 2, PR domain

zf-C2H2_6aa 229–251UCSCC2H2-type zinc finger

zf-C2H2aa 281–303UCSCZinc finger, C2H2 type

zf-C2H2aa 309–331UCSCZinc finger, C2H2 type

zf-C2H2aa 337–360UCSCZinc finger, C2H2 type

zf-C2H2aa 366–388UCSCZinc finger, C2H2 type

Gene Aliases

HGNC Name

PR/SET domain 16

HGNC Alias Symbols

MEL1; PFM13; KIAA1675; MGC166915; KMT8F

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_022114.4

p.P79L

c.236C>T

Surrounding Variants

1 paper

NM_022114.4

p.I80F

c.238A>T

1 paper

NM_022114.4

p.D83delFs

c.249delC

1 paper

NM_022114.4

p.I74V

c.220A>G

1 paper

NM_022114.4

p.E85*

c.253G>T

1 paper

NM_022114.4

p.L86L

c.258C>A

1 paper

NM_022114.4

p.V72fs

c.214_215fs

1 paper

NM_022114.4

p.R87fs

c.259_260fs

1 paper

NM_022114.4

p.R87delFs

c.260_261delGA

1 paper

NM_022114.4

p.P71L

c.212C>T

1 paper

NM_022114.4

p.P71delFs

c.213delT

1 paper

NM_022114.4

p.R87Q

c.260G>A

1 paper

NM_022114.4

p.E88D

c.264G>C