Varaico: Literature-Extracted Genetic Variants

PTCH1

2,098 papers

RefSeq Summary

This gene encodes a member of the patched family of proteins and a component of the hedgehog signaling pathway. Hedgehog signaling is important in embryonic development and tumorigenesis. The encoded ...

Pfam Domains

TRA2_Naa 147–297UCSCTransformer protein 2 N-terminal domain

Sterol-sensingaa 462–616UCSCSterol-sensing domain of SREBP cleavage-activation

Gene Aliases

HGNC Name

patched 1

HGNC Previous Symbol

NBCCS

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_000264.5

p.I868fs

c.2602_2603fs

Surrounding Variants

1 paper

NM_000264.5

p.K867_I868insFs

c.2601_2602dupAA

1 paper

NM_000264.5

p.I868fs

c.2602_2603fs

1 paper

NM_000264.5

p.G866E

c.2597G>A

2 papers

NM_000264.5

p.N871fs

c.2611_2612fs

1 paper

NM_000264.5

p.N871D

c.2611A>G

3 papers

NM_000264.5

p.G866R

c.2596G>C

3 papers

NM_000264.5

p.G866R

c.2596G>A

3 papers

NM_000264.5

p.T865delFs

c.2595delG

1 paper

NM_000264.5

p.L855_T865del11

c.2563_2594del33

1 paper

NM_000264.5

p.T865T

c.2595C>T

1 paper

NM_000264.5

p.N871K

c.2613C>G

1 paper

NM_000264.5

p.N871fs

c.2611_2612fs