Varaico: Literature-Extracted Genetic Variants

PTPRF

257 papers

RefSeq Summary

The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell gro...

Pfam Domains

I-setaa 33–124UCSCImmunoglobulin I-set domain

I-setaa 135–225UCSCImmunoglobulin I-set domain

I-setaa 232–315UCSCImmunoglobulin I-set domain

fn3aa 320–407UCSCFibronectin type III domain

fn3aa 415–506UCSCFibronectin type III domain

fn3aa 513–600UCSCFibronectin type III domain

Gene Aliases

HGNC Name

protein tyrosine phosphatase receptor type F

HGNC Previous Symbol

LAR

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_002840.5

p.V53M

c.157G>A

Surrounding Variants

1 paper

NM_002840.5

p.V53V

c.159G>C

2 papers

NM_002840.5

p.S51F

c.152C>T

1 paper

NM_002840.5

p.T57A

c.169A>G

1 paper

NM_002840.5

p.V49I

c.145G>A

1 paper

NM_002840.5

p.T57K

c.170C>A

2 papers

NM_002840.5

p.P62L

c.185C>T

1 paper

NM_002840.5

p.R63H

c.188G>A

1 paper

NM_002840.5

p.R63P

c.188G>C

1 paper

NM_002840.5

p.K69*

c.205A>T

1 paper

NM_002840.5

p.G70R

c.208G>A

1 paper

NM_002840.5

p.G70R

c.208G>C

1 paper

NM_002840.5

p.S74N

c.221G>A