Varaico: Literature-Extracted Genetic Variants

PTPRF

257 papers

RefSeq Summary

The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell gro...

Pfam Domains

I-setaa 33–124UCSCImmunoglobulin I-set domain

I-setaa 135–225UCSCImmunoglobulin I-set domain

I-setaa 232–315UCSCImmunoglobulin I-set domain

fn3aa 320–407UCSCFibronectin type III domain

fn3aa 415–506UCSCFibronectin type III domain

fn3aa 513–600UCSCFibronectin type III domain

Gene Aliases

HGNC Name

protein tyrosine phosphatase receptor type F

HGNC Previous Symbol

LAR

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_002840.5

p.Y105F

c.314A>T

Surrounding Variants

1 paper

NM_002840.5

p.V98M

c.292G>A

1 paper

NM_002840.5

p.E115D

c.345G>T

3 papers

NM_002840.5

p.R92W

c.274C>T

1 paper

NM_002840.5

p.G86R

c.256G>A

1 paper

NM_002840.5

p.G86R

c.256G>C

1 paper

NM_002840.5

p.E82D

c.246G>C

1 paper

NM_002840.5

p.E82D

c.246G>T

1 paper

NM_002840.5

p.E82K

c.244G>A

1 paper

NM_002840.5

p.S75F

c.224C>T

1 paper

NM_002840.5

p.S74N

c.221G>A

1 paper

NM_002840.5

p.G70R

c.208G>A

1 paper

NM_002840.5

p.G70R

c.208G>C