Varaico: Literature-Extracted Genetic Variants

PTPRF

257 papers

RefSeq Summary

The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell gro...

Pfam Domains

I-setaa 33–124UCSCImmunoglobulin I-set domain

I-setaa 135–225UCSCImmunoglobulin I-set domain

I-setaa 232–315UCSCImmunoglobulin I-set domain

fn3aa 320–407UCSCFibronectin type III domain

fn3aa 415–506UCSCFibronectin type III domain

fn3aa 513–600UCSCFibronectin type III domain

Gene Aliases

HGNC Name

protein tyrosine phosphatase receptor type F

HGNC Previous Symbol

LAR

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_002840.5

p.G655R

c.1963G>A

Surrounding Variants

1 paper

NM_002840.5

p.R654R

c.1962C>T

1 paper

NM_002840.5

p.R654H

c.1961G>A

1 paper

NM_002840.5

p.V659del1

c.1975_1976delGTG

1 paper

NM_002840.5

p.V649V

c.1947G>A

1 paper

NM_002840.5

p.S668N

c.2003G>A

1 paper

NM_002840.5

p.I639L

c.1915A>C

1 paper

NM_002840.5

p.V638I

c.1912G>A

5 papers

NM_002840.5

p.R635C

c.1903C>T

1 paper

NM_002840.5

p.A632V

c.1895C>T

1 paper

NM_002840.5

p.R681W

c.2041C>T

1 paper

NM_002840.5

p.V628F

c.1882G>T

1 paper

NM_002840.5

p.W683*

c.2048G>A