Varaico: Literature-Extracted Genetic Variants

PTPRF

257 papers

RefSeq Summary

The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell gro...

Pfam Domains

I-setaa 33–124UCSCImmunoglobulin I-set domain

I-setaa 135–225UCSCImmunoglobulin I-set domain

I-setaa 232–315UCSCImmunoglobulin I-set domain

fn3aa 320–407UCSCFibronectin type III domain

fn3aa 415–506UCSCFibronectin type III domain

fn3aa 513–600UCSCFibronectin type III domain

Gene Aliases

HGNC Name

protein tyrosine phosphatase receptor type F

HGNC Previous Symbol

LAR

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_002840.5

p.K1644_L1645Splc

c.4933-4A>G

Surrounding Variants

1 paper

NM_002840.5

p.T1653_N1664del12

c.4957_4991del36

1 paper

NM_002840.5

p.A1659_L1670del12

c.4975_5009del36

1 paper

NM_002840.5

p.K1667_N1672del6

c.4999_5015del18

1 paper

NM_002840.5

p.K1667_V1681del15

c.4999_5042del45

1 paper

NM_002840.5

p.N1668_L1670del3

c.5002_5009del9

1 paper

NM_002840.5

p.N1668_T1679del12

c.5002_5036del36

2 papers

NM_002840.5

p.R1669W

c.5005C>T

1 paper

NM_002840.5

p.V1671_P1685del15

c.5011_5054del45

1 paper

NM_002840.5

p.V1671L

c.5011G>C

1 paper

NM_002840.5

p.V1671L

c.5011G>T

1 paper

NM_002840.5

p.P1675_E1677del3

c.5023_5030del9

1 paper

NM_002840.5

p.T1679A

c.5035A>G