Varaico: Literature-Extracted Genetic Variants

PTPRJ

210 papers

RefSeq Summary

The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes, including cell gr...

Pfam Domains

fn3aa 120–202UCSCFibronectin type III domain

fn3aa 366–447UCSCFibronectin type III domain

fn3aa 541–625UCSCFibronectin type III domain

PTP_tmaa 835–965UCSCTM proximal of protein tyrosine phosphatase, receptor type J

Y_phosphataseaa 1065–1297UCSCProtein-tyrosine phosphatase

Gene Aliases

HGNC Name

protein tyrosine phosphatase receptor type J

HGNC Alias Symbols

DEP1; HPTPeta; CD148

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

4 papers

NM_002843.4

p.R418H

c.1253G>A

Surrounding Variants

1 paper

NM_002843.4

p.P422S

c.1264C>T

1 paper

NM_002843.4

p.P422L

c.1265C>T

2 papers

NM_002843.4

p.R425H

c.1274G>A

1 paper

NM_002843.4

p.S427N

c.1280G>A

1 paper

NM_002843.4

p.E406D

c.1218G>C

1 paper

NM_002843.4

p.E406D

c.1218G>T

1 paper

NM_002843.4

p.E406fs

c.1216_1217fs

1 paper

NM_002843.4

p.N431S

c.1292A>G

1 paper

NM_002843.4

p.G405V

c.1214G>T

1 paper

NM_002843.4

p.A404A

c.1212G>A

1 paper

NM_002843.4

p.A404V

c.1211C>T

1 paper

NM_002843.4

p.H402Y

c.1204C>T