Varaico: Literature-Extracted Genetic Variants

PTPRT

370 papers

RefSeq Summary

The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell gro...

Pfam Domains

MAMaa 32–190UCSCMAM domain, meprin/A5/mu

fn3aa 498–584UCSCFibronectin type III domain

Fn3_PTPRUaa 585–729UCSCReceptor-type tyrosine-protein phosphatase U Fn3 domain

Y_phosphataseaa 931–1161UCSCProtein-tyrosine phosphatase

Y_phosphataseaa 1221–1455UCSCProtein-tyrosine phosphatase

Gene Aliases

HGNC Name

protein tyrosine phosphatase receptor type T

HGNC Alias Symbols

RPTPrho; KIAA0283

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_007050.6

p.S3R

c.9C>G

Surrounding Variants

1 paper

NM_007050.6

p.S3R

c.9C>A

1 paper

NM_007050.6

p.S3R

c.7A>C

1 paper

NM_007050.6

p.A5P

c.13G>C

1 paper

NM_007050.6

p.A5T

c.13G>A

1 paper

NM_007050.6

p.L9_S10insFs

c.27_28ins17

1 paper

NM_007050.6

p.L20L

c.60G>A

1 paper

NM_007050.6

p.Q26L

c.77A>T

8 papers

NM_007050.6

p.A29P

c.85G>C

1 paper

NM_007050.6

p.A29T

c.85G>A