Varaico: Literature-Extracted Genetic Variants

SCN5A

2,996 papers

RefSeq Summary

The protein encoded by this gene is an integral membrane protein and tetrodotoxin-resistant voltage-gated sodium channel subunit. This protein is found primarily in cardiac muscle and is responsible f...

Pfam Domains

Ion_transaa 130–423UCSCIon transport protein

Na_trans_cytoplaa 507–667UCSCCytoplasmic domain of voltage-gated Na+ ion channel

Ion_transaa 716–949UCSCIon transport protein

Na_trans_assocaa 953–1200UCSCSodium ion transport-associated

Ion_transaa 1204–1481UCSCIon transport protein

Ion_transaa 1527–1783UCSCIon transport protein

Gene Aliases

HGNC Name

sodium voltage-gated channel alpha subunit 5

HGNC Previous Symbol

CMD1E

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_000335.5

p.T559K

c.1676C>A

Surrounding Variants

4 papers

NM_000335.5

p.T559I

c.1676C>T

8 papers

NM_000335.5

p.T559A

c.1675A>G

1 paper

NM_000335.5

p.H558Q

c.1674C>G

1 paper

NM_000335.5

p.H558fs

c.1672_1673fs

1 paper

NM_000335.5

p.H558L

c.1673A>T

410 papers

NM_000335.5

p.H558R

c.1673A>G

2 papers

NM_000335.5

p.H558delFs

c.1672delG

2 papers

NM_000335.5

p.H558fs

c.1672_1673fs

9 papers

NM_000335.5

p.S560S

c.1680A>T

6 papers

NM_000335.5

p.L561L

c.1681C>T

1 paper

NM_000335.5

p.L561L

c.1683G>T

1 paper

NM_000335.5

p.L561_L562ins1

c.1683_1684insAGC