Varaico: Literature-Extracted Genetic Variants

SDK1

230 papers

RefSeq Summary

The protein encoded by this gene is a member of the immunoglobulin superfamily. The protein contains six immunoglobulin-like domains and thirteen fibronectin type III domains. Fibronectin type III dom...

Pfam Domains

Ig_3aa 104–173UCSCImmunoglobulin domain

I-setaa 192–278UCSCImmunoglobulin I-set domain

Ig_3aa 292–365UCSCImmunoglobulin domain

I-setaa 386–475UCSCImmunoglobulin I-set domain

I-setaa 480–570UCSCImmunoglobulin I-set domain

I-setaa 574–664UCSCImmunoglobulin I-set domain

Gene Aliases

HGNC Name

sidekick cell adhesion molecule 1

HGNC Alias Symbol

FLJ31425

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

3 papers

NM_152744.4

p.T1181M

c.3542C>T

Surrounding Variants

1 paper

NM_152744.4

p.V1180D

c.3539T>A

1 paper

NM_152744.4

p.V1180A

c.3539T>C

1 paper

NM_152744.4

p.V1180I

c.3538G>A

1 paper

NM_152744.4

p.A1185T

c.3553G>A

1 paper

NM_152744.4

p.S1189G

c.3565A>G

1 paper

NM_152744.4

p.V1154_G1155ins5

c.3460_3464ins15

1 paper

NM_152744.4

p.G1204R

c.3610G>A

1 paper

NM_152744.4

p.G1204R

c.3610G>C

1 paper

NM_152744.4

p.P1206T

c.3616C>A

1 paper

NM_152744.4

p.R1217C

c.3649C>T

2 papers

NM_152744.4

p.R1232Q

c.3695G>A

1 paper

NM_152744.4

p.E1240K

c.3718G>A