Varaico: Literature-Extracted Genetic Variants

SDK1

230 papers

RefSeq Summary

The protein encoded by this gene is a member of the immunoglobulin superfamily. The protein contains six immunoglobulin-like domains and thirteen fibronectin type III domains. Fibronectin type III dom...

Pfam Domains

Ig_3aa 104–173UCSCImmunoglobulin domain

I-setaa 192–278UCSCImmunoglobulin I-set domain

Ig_3aa 292–365UCSCImmunoglobulin domain

I-setaa 386–475UCSCImmunoglobulin I-set domain

I-setaa 480–570UCSCImmunoglobulin I-set domain

I-setaa 574–664UCSCImmunoglobulin I-set domain

Gene Aliases

HGNC Name

sidekick cell adhesion molecule 1

HGNC Alias Symbol

FLJ31425

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_152744.4

p.V1347V

c.4041G>A

Surrounding Variants

1 paper

NM_152744.4

p.D1375D

c.4125C>T

1 paper

NM_152744.4

p.K1319R

c.3956A>G

1 paper

NM_152744.4

p.A1318P

c.3952G>C

1 paper

NM_152744.4

p.R1317W

c.3949C>T

1 paper

NM_152744.4

p.I1314T

c.3941T>C

1 paper

NM_152744.4

p.P1380L

c.4139C>T

1 paper

NM_152744.4

p.E1388K

c.4162G>A

1 paper

NM_152744.4

p.V1389A

c.4166T>C

1 paper

NM_152744.4

p.S1393S

c.4179C>T

2 papers

NM_152744.4

p.V1394M

c.4180G>A

1 paper

NM_152744.4

p.R1395W

c.4183C>T

3 papers

NM_152744.4

p.R1395Q

c.4184G>A