Varaico: Literature-Extracted Genetic Variants

SDK1

230 papers

RefSeq Summary

The protein encoded by this gene is a member of the immunoglobulin superfamily. The protein contains six immunoglobulin-like domains and thirteen fibronectin type III domains. Fibronectin type III dom...

Pfam Domains

Ig_3aa 104–173UCSCImmunoglobulin domain

I-setaa 192–278UCSCImmunoglobulin I-set domain

Ig_3aa 292–365UCSCImmunoglobulin domain

I-setaa 386–475UCSCImmunoglobulin I-set domain

I-setaa 480–570UCSCImmunoglobulin I-set domain

I-setaa 574–664UCSCImmunoglobulin I-set domain

Gene Aliases

HGNC Name

sidekick cell adhesion molecule 1

HGNC Alias Symbol

FLJ31425

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

3 papers

NM_152744.4

p.E1643G

c.4928A>G

Surrounding Variants

3 papers

NM_001079653.2

p.H128R

c.383A>G

NM_152744.4

p.H1641R

c.4922A>G

1 paper

NM_152744.4

p.I1638V

c.4912A>G

1 paper

NM_152744.4

p.E1620K

c.4858G>A

1 paper

NM_152744.4

p.D1604G

c.4811A>G

1 paper

NM_152744.4

p.A1646Splc

c.4937-4A>G

2 papers

NM_152744.4

p.S1659S

c.4977G>A

1 paper

NM_152744.4

p.T1660T

c.4980G>A

1 paper

NM_152744.4

p.R1672H

c.5015G>A

1 paper

NM_152744.4

p.Y1673C

c.5018A>G

1 paper

NM_152744.4

p.A1679T

c.5035G>A

1 paper

NM_152744.4

p.I1683I

c.5049C>T

1 paper

NM_152744.4

p.E1685delFs

c.5055delG