Varaico: Literature-Extracted Genetic Variants

SDK1

230 papers

RefSeq Summary

The protein encoded by this gene is a member of the immunoglobulin superfamily. The protein contains six immunoglobulin-like domains and thirteen fibronectin type III domains. Fibronectin type III dom...

Pfam Domains

Ig_3aa 104–173UCSCImmunoglobulin domain

I-setaa 192–278UCSCImmunoglobulin I-set domain

Ig_3aa 292–365UCSCImmunoglobulin domain

I-setaa 386–475UCSCImmunoglobulin I-set domain

I-setaa 480–570UCSCImmunoglobulin I-set domain

I-setaa 574–664UCSCImmunoglobulin I-set domain

Gene Aliases

HGNC Name

sidekick cell adhesion molecule 1

HGNC Alias Symbol

FLJ31425

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

3 papers

NM_152744.4

p.T1769P

c.5305A>C

Surrounding Variants

1 paper

NM_152744.4

p.P1759P

c.5277C>T

1 paper

NM_152744.4

p.P1759R

c.5276C>G

1 paper

NM_152744.4

p.G1785E

c.5354G>A

1 paper

NM_152744.4

p.T1750M

c.5249C>T

1 paper

NM_152744.4

p.K1789M

c.5366A>T

1 paper

NM_152744.4

p.Q1794K

c.5380C>A

1 paper

NM_152744.4

p.G1795R

c.5383G>A

1 paper

NM_152744.4

p.G1795R

c.5383G>C

1 paper

NM_152744.4

p.P1802H

c.5405C>A

1 paper

NM_152744.4

p.A1809S

c.5425G>T

1 paper

NM_152744.4

p.V1820M

c.5458G>A

1 paper

NM_152744.4

p.S1821C

c.5462C>G