Varaico: Literature-Extracted Genetic Variants

Gene:SETX
Variant:p.F879L

SETX

708 papers

RefSeq Summary

This gene encodes a protein named for its homology to the Sen1p protein of fungi which has RNA helicase activity encoded by a domain at the C-terminal end of the protein. The protein encoded by this g...

Pfam Domains

AAA_11aa 1933–2218UCSCAAA domain
AAA_12aa 2225–2426UCSCAAA domain

Gene Aliases

HGNC Name

senataxin

HGNC Previous Symbols

ALS4; SCAR1

Papers
RefSeq ID
Protein change
DNA change
Selected Variant
1 paper
NM_015046.7
p.F879L
c.2637C>A
Surrounding Variants
1 paper
NM_015046.7
p.F879L
c.2637C>G
1 paper
NM_015046.7
p.F879L
c.2635T>C
1 paper
NM_015046.7
p.N883D
c.2647A>G
1 paper
NM_015046.7
p.V875fs
c.2623_2624fs
1 paper
NM_015046.7
p.L874fs
c.2620_2621fs
2 papers
NM_015046.7
p.Q887*
c.2659C>T
1 paper
NM_015046.7
p.K870del1
c.2608_2609delCTT
1 paper
NM_015046.7
p.L869_K870del1
c.2607_2609delTTT
7 papers
NM_015046.7
p.V891A
c.2672T>C
7 papers
NM_015046.7
p.Q868*
c.2602C>T
1 paper
NM_015046.7
p.D892delFs
c.2674_2675delTC
1 paper
NM_015046.7
p.V862_L863ins16
c.2584_2588ins48
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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."