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Varaico: Literature-Extracted Genetic Variants

Include likely false extractions

Gene:SLC22A15

Variant:p.A98T

SLC22A15

44 papers

RefSeq Summary

Organic ion transporters, such as SLC22A15, transport various medically and physiologically important compounds, including pharmaceuticals, toxins, hormones, neurotransmitters, and cellular metabolite...

Pfam Domains

Sugar_traa 69–496UCSCSugar (and other) transporter

Gene Aliases

HGNC Name

solute carrier family 22 member 15

HGNC Alias Symbol

FLIPT1

Papers

Position

RefSeq ID

Protein change

DNA change

Pfam

gnomAD

Selected Variant

1 paper

chr1:115992235 G>A

NM_018420.3

p.A98T

c.292G>A

Sugar_tr

Exome: 0.0% (AC=27, hom=0)Genome: 0.0% (AC=10, hom=0)241 overlapping SVs

Surrounding Variants

1 paper

chr1:115992231 C>T

NM_018420.3

p.S96S

c.288C>T

Sugar_tr

Exome: 61.3% (AC=878066, hom=274389)Genome: 48.5% (AC=73860, hom=20665)241 overlapping SVs

1 paper

chr1:115992218 G>C

NM_018420.3

p.S92T

c.275G>C

Sugar_tr

Exome: 0.6% (AC=8978, hom=35)Genome: 0.4% (AC=595, hom=2)241 overlapping SVs

1 paper

chr1:115992184 G>A

NM_018420.3

p.G81S

c.241G>A

Sugar_tr

Exome: 0.0% (AC=6, hom=0)Genome: n/a241 overlapping SVs

1 paper

chr1:115992139 G>T

NM_018420.3

p.A66S

c.196G>T

exact variant not in gnomAD241 overlapping SVs

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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."