Varaico: Literature-Extracted Genetic Variants

Gene:SMG5

SMG5

109 papers

RefSeq Summary

SMG5 is involved in nonsense-mediated mRNA decay (Ohnishi et al., 2003 [PubMed 14636577]).[supplied by OMIM, Mar 2008].

Pfam Domains

EST1aa 77–189UCSCTelomerase activating protein Est1
EST1_DNA_bindaa 197–421UCSCEst1 DNA/RNA binding domain
PIN_4aa 857–968UCSCPIN domain

Gene Aliases

HGNC Name

SMG5 nonsense mediated mRNA decay factor

HGNC Alias Symbols

KIAA1089; LPTS-RP1; LPTSRP1; RP11-54H19.7; SMG-5; EST1B

Papers
RefSeq ID
Protein change
DNA change
1–12 of 117 variants
3 papers
NM_015327.3
p.R173Q
c.518G>A
3 papers
NM_015327.3
p.R543W
c.1627C>T
2 papers
NM_015327.3
p.I355V
c.1063A>G
2 papers
NM_015327.3
p.L552F
c.1654C>T
2 papers
NM_015327.3
p.R637W
c.1909C>T
2 papers
NM_015327.3
p.R640C
c.1918C>T
2 papers
NM_015327.3
p.D893A
c.2678A>C
1 paper
NM_015327.3
p.M1K
c.2T>A
1 paper
NM_015327.3
p.T7fs
c.19_20fs
1 paper
NM_015327.3
p.G8fs
c.22_23fs
1 paper
NM_015327.3
p.V17A
c.50T>C
1 paper
NM_015327.3
p.R33*
c.97C>T
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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."