Varaico: Literature-Extracted Genetic Variants

SMN1

1,019 papers

RefSeq Summary

This gene is part of a 500 kb inverted duplication on chromosome 5q13. This duplicated region contains at least four genes and repetitive elements which make it prone to rearrangements and deletions. ...

Pfam Domains

SMN_G2-BDaa 27–55UCSCSurvival Motor Neuron, Gemin2-binding domain

SMN_Tudoraa 90–146UCSCSurvival motor neuron protein (SMN), Tudor domain

SMN_YG-boxaa 226–293UCSCSurvival Motor Neuron, YG-box

Gene Aliases

HGNC Name

survival of motor neuron 1, telomeric

HGNC Previous Symbols

SMA@; SMA

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

2 papers

NM_000344.4

p.D17A

c.50A>C

Surrounding Variants

2 papers

NM_000344.4

p.D17G

c.50A>G

1 paper

NM_000344.4

p.D17V

c.50A>T

1 paper

NM_000344.4

p.S18del1

c.52_53delTCC

1 paper

NM_000344.4

p.S18_F21del4

c.52_62del12

2 papers

NM_000344.4

p.E16_V19insFs

c.48_55dup8

2 papers

NM_000344.4

p.E16A

c.47A>C

1 paper

NM_000344.4

p.E16G

c.47A>G

1 paper

NM_000344.4

p.E16V

c.47A>T

1 paper

NM_000344.4

p.S18F

c.53C>T

2 papers

NM_000344.4

p.Q15Q

c.45G>A

2 papers

NM_000344.4

p.V19M

c.55G>A

1 paper

NM_000344.4

p.Q15H

c.45G>C