Varaico: Literature-Extracted Genetic Variants

Gene:SP1
Variant:p.H642H

SP1

825 papers

RefSeq Summary

The protein encoded by this gene is a zinc finger transcription factor that binds to GC-rich motifs of many promoters. The encoded protein is involved in many cellular processes, including cell differ...

Pfam Domains

zf-C2H2aa 626–650UCSCZinc finger, C2H2 type
zf-C2H2aa 626–650UCSCZinc finger, C2H2 type
zf-C2H2aa 656–680UCSCZinc finger, C2H2 type
zf-C2H2aa 656–680UCSCZinc finger, C2H2 type
zf-C2H2aa 686–708UCSCZinc finger, C2H2 type
zf-C2H2aa 686–708UCSCZinc finger, C2H2 type

Gene Aliases

HGNC Name

Sp1 transcription factor

HGNC Alias Name

specificity protein 1

Papers
RefSeq ID
Protein change
DNA change
Selected Variant
1 paper
NM_138473.3
p.H642H
c.1926C>T
Surrounding Variants
1 paper
NM_138473.3
p.S641A
c.1921T>G
1 paper
NM_138473.3
p.K639R
c.1916A>G
1 paper
NM_138473.3
p.R648C
c.1942C>T
1 paper
NM_138473.3
p.G652D
c.1955G>A
1 paper
NM_138473.3
p.I630L
c.1888A>C
1 paper
NM_138473.3
p.I630V
c.1888A>G
2 papers
NM_138473.3
p.F656V
c.1966T>G
1 paper
NM_138473.3
p.G664E
c.1991G>A
1 paper
NM_138473.3
p.G664A
c.1991G>C
1 paper
NM_138473.3
p.K665delFs
c.1995delA
1 paper
NM_138473.3
p.K665fs
c.1993_1994fs
1 paper
NM_138473.3
p.K665fs
c.1993_1994fs
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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."