Varaico: Literature-Extracted Genetic Variants

Gene:SPOCD1
Variant:p.K662E

SPOCD1

94 papers

RefSeq Summary

This gene encodes a protein that belongs to the TFIIS family of transcription factors. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Aug 2013].

Pfam Domains

TFIIS_Maa 606–720UCSCTranscription factor S-II (TFIIS), central domain
SPOCaa 857–1017UCSCSPOC domain

Gene Aliases

HGNC Name

SPOC domain containing 1

HGNC Alias Symbols

FLJ25348; PPP1R146

Papers
RefSeq ID
Protein change
DNA change
Selected Variant
1 paper
NM_144569.7
p.K662E
c.1984A>G
Surrounding Variants
1 paper
NM_144569.7
p.G657A
c.1970G>C
1 paper
NM_144569.7
p.G657S
c.1969G>A
2 papers
NM_144569.7
p.R671W
c.2011C>T
1 paper
NM_144569.7
p.L627R
c.1880T>G
1 paper
NM_144569.7
p.R625W
c.1873C>T
1 paper
NM_144569.7
p.L624F
c.1870C>T
1 paper
NM_144569.7
p.M695R
c.2084T>G
1 paper
NM_144569.7
p.G607A
c.1820G>C
1 paper
NM_144569.7
p.P602P
c.1806A>G
1 paper
NM_144569.7
p.S570S
c.1710G>A
1 paper
NM_144569.7
p.D547Y
c.1639G>T
1 paper
NM_144569.7
p.Q534_V535Splc
c.1603-2A>G
UCSC Genome Browser·Imprint·Privacy·Terms·Feedback·Email Updates·

Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."