Varaico: Literature-Extracted Genetic Variants

SPOCK3

30 papers

RefSeq Summary

This gene encodes a member of a novel family of calcium-binding proteoglycan proteins that contain thyroglobulin type-1 and Kazal-like domains. The encoded protein and may play a role in adult T-cell ...

Pfam Domains

Kazal_2aa 137–183UCSCKazal-type serine protease inhibitor domain

SPARC_Ca_bdgaa 198–308UCSCSecreted protein acidic and rich in cysteine Ca binding region

Thyroglobulin_1aa 317–380UCSCThyroglobulin type-1 repeat

Gene Aliases

HGNC Name

SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3

HGNC Alias Symbol

testican-3

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

2 papers

NM_001040159.2

p.C9W

c.27T>G

Surrounding Variants

2 papers

NM_001040159.2

p.V10A

c.29T>C

2 papers

NM_001040159.2

p.C11_A12delFs

c.33_34delCA

1 paper

NM_001040159.2

p.A12fs

c.34_35fs

1 paper

NM_001040159.2

p.C11_A12del2

c.31_35del6

1 paper

NM_001040159.2

p.V4delFs

c.11_12delCA

1 paper

NM_001040159.2

p.W15C

c.45G>T

1 paper

NM_001040159.2

p.G31E

c.92G>A

1 paper

NM_001040159.2

p.S33_D34del2

c.97_101del6