Varaico: Literature-Extracted Genetic Variants

Gene:SPOP
Variant:p.F136L

SPOP

535 papers

RefSeq Summary

This gene encodes a protein that may modulate the transcriptional repression activities of death-associated protein 6 (DAXX), which interacts with histone deacetylase, core histones, and other histone...

Pfam Domains

MATH_2aa 33–161UCSCMATH domain
BTBaa 190–297UCSCBTB/POZ domain
BACK_BPM_SPOPaa 301–353UCSCBPM/SPOP, BACK domain

Gene Aliases

HGNC Name

speckle type BTB/POZ protein

HGNC Alias Symbols

TEF2; BTBD32

Papers
RefSeq ID
Protein change
DNA change
Selected Variant
2 papers
NM_001007228.2
p.F136L
c.406T>C
Surrounding Variants
2 papers
NM_001007228.2
p.F136L
c.408C>G
2 papers
NM_001007228.2
p.F136L
c.408C>A
12 papers
NM_001007228.2
p.K134N
c.402G>T
12 papers
NM_001007228.2
p.K134N
c.402G>C
1 paper
NM_001007228.2
p.K134T
c.401A>C
5 papers
NM_001007228.2
p.R138C
c.412C>T
1 paper
NM_001007228.2
p.R138P
c.413G>C
2 papers
NM_001007228.2
p.R138H
c.413G>A
1 paper
NM_001007228.2
p.F133F
c.399C>T
89 papers
NM_001007228.2
p.F133L
c.399C>G
89 papers
NM_001007228.2
p.F133L
c.399C>A
23 papers
NM_001007228.2
p.F133C
c.398T>G
UCSC Genome Browser·Imprint·Privacy·Terms·Feedback·Email Updates·

Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."