Varaico: Literature-Extracted Genetic Variants

Gene:SPOP
Variant:p.F104I

SPOP

535 papers

RefSeq Summary

This gene encodes a protein that may modulate the transcriptional repression activities of death-associated protein 6 (DAXX), which interacts with histone deacetylase, core histones, and other histone...

Pfam Domains

MATH_2aa 33–161UCSCMATH domain
BTBaa 190–297UCSCBTB/POZ domain
BACK_BPM_SPOPaa 301–353UCSCBPM/SPOP, BACK domain

Gene Aliases

HGNC Name

speckle type BTB/POZ protein

HGNC Alias Symbols

TEF2; BTBD32

Papers
RefSeq ID
Protein change
DNA change
Selected Variant
2 papers
NM_001007228.2
p.F104I
c.310T>A
Surrounding Variants
2 papers
NM_001007228.2
p.F104V
c.310T>G
6 papers
NM_001007228.2
p.F104C
c.311T>G
5 papers
NM_001007228.2
p.F104S
c.311T>C
1 paper
NM_001007228.2
p.S105A
c.313T>G
3 papers
NM_001007228.2
p.S105F
c.314C>T
5 papers
NM_001007228.2
p.F102L
c.306C>G
1 paper
NM_001007228.2
p.F102fs
c.304_305fs
5 papers
NM_001007228.2
p.F102L
c.306C>A
88 papers
NM_001007228.2
p.F102C
c.305T>G
6 papers
NM_001007228.2
p.F102S
c.305T>C
5 papers
NM_001007228.2
p.F102Y
c.305T>A
28 papers
NM_001007228.2
p.F102V
c.304T>G
UCSC Genome Browser·Imprint·Privacy·Terms·Feedback·Email Updates·

Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."